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SNP web app

Page history last edited by Administrator 10 years, 3 months ago

Compare the specific markers reviewed in consumer genomic tests

 

Breast cancer                                                                                                                                                 Unfinished application in process

 

Chr or Locus

Gene

SNP

deCODEme

Navigenics

23andme

1p11.2


rs11249433

#10

 

 

2q33.1

CASP8

rs1045485

 

#2

 

2q33.1

CASP8

rs17468277

#2

 

 

2q35


rs13387042

#8

#8

 

3

NEK10

rs4973768

#1

 

 

5q11.2

MAP3K1

rs4700485

#4

 

 

5q11.2

MAP3K1

rs889312

 

#4

 

5p12

MRPS30

rs4415084

#9

 

 

8q24


rs672888

#4

 

 

8q24.21


rs13281615

 

#4

 

10q26.13

FGFR2

rs2981582

#4

#4

 

10q26.13

FGFR2

rs1219648

 

 

#3,4,5,6

10q26.13

FGFR2

rs2420946

 

 

#3,4,5,6

11p15.5

LSP1

rs3817198

#4

#4

 

14q24.1

RAD51L1

rs999737

#10

 

 

16q12.1

TNRC9/TOX3

rs3803662

#8

#8

#4,7,8

17

COX11

rs7222197

#1

 

 

Total

13

17

12

7

3







                      Research references cited by consumer genomic companies:


1

Ahmed, S et al. Nat Genet. 2009 Mar;41(3):324-8.


2

Cox, A et al. Nat Genet. 2007 Mar;39(3):352-8.


3

Dickson et al. (2000) Breast Cancer Res 2(3):191-6.


4

Easton, DF et al. Nature. 2007 Jun 28;447(7148).


5

Hunter et al. (2007) Nat Genet 39(7):870-4.



6

Moffa and Ethier (2007) J Cell Physiol 210(3):720-31.


7

Smid et al. (2006) J Clin Oncol 24(15):2261-7.


8

Stacey, SN et al. Nat Genet. 2007 Jul;39(7):865-9.


9

Stacey, SN et al. Nat Genet. 2008 Jun;40(6):703-6.


10

Thomas, G et al. Nat Genet. 2009 Mar 29.



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